Ext sub on the k series tops engages the HPF side of the crossover so... Setting that on the tops, running the kick, bass and other stuff that needs the sub through your Aux mix and onto the Sub is a way to cut mic stand rumble, acoustic guitar boom, etc out of your system. I find that I can get a fat punchy mix doing that. Hte bass, kick, etc all goes into the main mix so it is represented in the tops as well and with exactly the same crossover impacts as though the tops were connected to the through on the sub.
Aux fed subs are one tool in the kit. Like any other tool, it can be misapplied. Ultimately your ears have to tell you that you have a good mix. Do it wrong and you can certainly get some funky results...